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020 _a9781071623176
024 7 _a10.1007/978-1-0716-2317-6
_2doi
040 _aES-MaUEC
_bspa
_cES-MaUEC
_dES-MaUEC
050 4 _aQH450
_b2022 EB
245 0 0 _aComputational Methods for Predicting Post-Translational Modification Sites
_cedited by Dukka B. KC
250 _a1st edition 2022
264 1 _aNew York, NY
_bSpringer International Publising
_c2022
300 _a1 recurso en línea (XVII, 326 páginas)
_b66 ilustraciones, 60 ilustraciones a color
336 _atexto
_btxt
_2rdacontent
337 _aelectrónico
_bc
_2rdamedia
338 _arecurso electrónico
_bcr
_2rdacarrier
347 _aarchivo de texto
_bPDF
490 0 _aMethods in Molecular Biology
_x1940-6029
_v2499
505 0 _aMaximizing Depth of PTM Coverage: Generating Robust MS Datasets for Computational Prediction Modeling -- PLDMS: Phosphopeptide Library Dephosphorylation followed by Mass Spectrometry Analysis to Determine the Specificity of Phosphatases for Dephosphorylation Site Sequences -- FEPS: A tool for Feature Extraction from Protein Sequence -- A pre-trained ELECTRA model for Kinase-specific Phosphorylation Site Prediction -- iProtGly-SS: A Tool to Accurately Predict Protein Glycation Site Using structural-based Features -- Functions of Glycosylation and Related Web Resources for its Prediction -- Analysis of Post-Translational Modifications in Arabidopsis Proteins and Metabolic Pathways using the FAT-PTM Database -- Bioinformatic Analyses of Peroxiredoxins and RF-Prx: A RANDOM FOREST-BASED PREDICTOR and classifier for Prxs -- Computational prediction of N- and O-linked glycosylation sites for human and mouse proteins -- iPTMnet RESTful API for Post-Translational Modification Network Analysis -- Systematic Characterization of Lysine Post-Translational Modification Sites using MUscADEL -- Enhancing the Discovery of Functional Post-Translational Modification Sites with Machine Learning Models - Development, Validation, and Interpretation -- Exploration of Protein Post-Translational Modification Landscape and Crosstalk with CrossTalkMapper -- PTM-X: Prediction of Post-Translational Modification Crosstalk Within and Across Proteins -- Deep Learning-Based Advances In Protein Post-Translational Modification Site And Protein Cleavage Prediction.
520 _aThis volume describes computational approaches to predict multitudes of PTM sites. Chapters describe in depth approaches on algorithms, state-of-the-art Deep Learning based approaches, hand-crafted features, physico-chemical based features, issues related to obtaining negative training, sequence-based features, and structure-based features. Written in the format of the highly successful Methods in Molecular Biology series, each chapter includes an introduction to the topic, lists necessary materials and reagents, includes tips on troubleshooting and known pitfalls, and step-by-step, readily reproducible protocols. Authoritative and cutting-edge, Authoritative and cutting-edge, Computational Methods for Predicting Post-Translational Modification Sites aims to be a useful guide for researchers who are interested in the field of PTM site prediction. .
988 _aSpringer_Protocols_2022
650 7 _2embne
_9138044
_aGenética
_vManuales de laboratorio
776 0 8 _iPrinted edition:
_z9781071623169
776 0 8 _iPrinted edition:
_z9781071623183
776 0 8 _iPrinted edition:
_z9781071623190
856 4 0 _uhttps://go.openathens.net/redirector/universidadeuropea.es?url=https://doi.org/10.1007/978-1-0716-2317-6
_zAcceso a este recurso digital (usuarios Universidad Europea de Madrid)
942 _2lcc
_cLE
998 _b07/2023
_dz
_eu
_zSI